Information for 18-CCABABACAGTADGCA (Motif 42)

G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
Reverse Opposite:
C G A T A T C G A T G C G C A T A C G T C T G A A G T C C G A T C T A G A C G T T A C G A G C T T G C A A C G T C A T G A C T G
p-value:1e-6
log p-value:-1.455e+01
Information Content per bp:1.772
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 20.7bp
Average Position of motif in Background36.4 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCABABACAGTADGCA
CCATATATGG------
 G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCABABACAGTADGCA
KCCAAAAATAGC-----
 A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCABABACAGTADGCA
TGACCATATATGGTCA---
 A C G T A C G T A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCABABACAGTADGCA
TTCCATATATGGAA----
 A C G T A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCABABACAGTADGCA
GCTATAAATAGC-----
 A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCABABACAGTADGCA
CCAAAAATAG------
 G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCABABACAGTADGCA
ACTATAAATAGA-----
 A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCABABACAGTADGCA
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCABABACAGTADGCA
DCYAAAAATAGM-----
 A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCABABACAGTADGCA
GCTAAAAATAGC-----
 A C G T G T A C G T A C C G T A A C G T C T G A A G T C C G T A G A T C C G T A C T A G A G C T G T C A C G A T T A C G A T G C C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T