Information for 19-TGATCTGASWRGT (Motif 40)

A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T
Reverse Opposite:
C G T A A G T C A G C T C G T A A T C G A C G T A G T C C G T A C T A G C T G A A C G T A G T C G T C A
p-value:1e-6
log p-value:-1.500e+01
Information Content per bp:1.800
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.0 +/- 17.9bp
Average Position of motif in Background50.6 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGATCTGASWRGT----
-GGATTGACAGGTCNTT
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGATCTGASWRGT----
-NTATTGACAGGTNNTN
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGATCTGASWRGT----
-NTATTGACAGCTNNTT
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGATCTGASWRGT----
-GTATTGACAGGTNNTT
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGATCTGASWRGT-
---CTTGAGTGGCT
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGATCTGASWRGT
----TTGACAG--
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGATCTGASWRGT----
-NNATTGACAGGTGCTT
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGATCTGASWRGT
GWAAYHTGABMC--
 A C G T A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGATCTGASWRGT----
-GTATTGACAGCTNNTT
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGATCTGASWRGT
TGACCTYA-----
 A C G T C T A G C G T A A G C T A G T C A C G T A C T G C G T A A T G C C G A T C T G A T C A G A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T