Information for 8-CCTCAGGAGA (Motif 39)

T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A
Reverse Opposite:
A G C T A G T C A C G T A G T C T A G C C G A T A C T G C T G A C A T G A C T G
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.532
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif417.6
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets48.5 +/- 26.0bp
Average Position of motif in Background51.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAGGAGA-
GCCTCAGGGCAT
 A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCTCAGGAGA-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCTCAGGAGA-
SCCTSAGGSCAW
 A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCTCAGGAGA-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAGGAGA-
TCCCCTGGGGAC
 A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCTCAGGAGA-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCTCAGGAGA
AGCCTCAGGCA-
 A C G T A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCTCAGGAGA
CGCCTCAGGCA-
 A C G T A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCTCAGGAGA
AGCCTCAGGCA-
 A C G T A C G T T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTCAGGAGA-
-NACAGGAAAT
 T G A C G T A C G A C T T G A C G C T A A T C G T C A G T G C A T C A G T C G A A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T