Information for 17-CCTTKTCATGTAG (Motif 36)

G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G
Reverse Opposite:
A T G C C G A T T G C A T G A C C G T A A C G T C T A G G T C A G T A C G T C A T C G A A T C G C A T G
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.684
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.1 +/- 26.0bp
Average Position of motif in Background51.3 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTTKTCATGTAG--
CTTTGTTATGCAAAT
 G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTTKTCATGTAG--
CATTGTTATGCAAAT
 G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTTKTCATGTAG
CTTTGT-------
 G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTTKTCATGTAG
CCATTGTTTT----
 A C G T G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTTKTCATGTAG
AACCTTATAT-----
 A C G T A C G T G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTTKTCATGTAG
GAGCCCTTGTCCCTAA-
 A C G T A C G T A C G T A C G T G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCTTKTCATGTAG-----
--NNNTTAGGTAGCNTNT
 G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCTTKTCATGTAG---
NNTTTTACATGTANNNT
 A C G T G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTTKTCATGTAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTTKTCATGTAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T G A T C T A G C A C G T A C G T A C T G A C G T A G T C T G C A G A C T A C T G A C G T C G T A A T C G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T