Information for 14-ATGAAWTTCTAAG (Motif 33)

C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T G C A T C G T A A T C G G T C A G C T A C G A T A C G T C G A T A G T C G T C A A C G T
p-value:1e-8
log p-value:-1.900e+01
Information Content per bp:1.795
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.4 +/- 17.5bp
Average Position of motif in Background37.6 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ATGAAWTTCTAAG
NNTNTCATGAATGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGAAWTTCTAAG----
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATGAAWTTCTAAG
ATATGCAAATNNN--
 A C G T A C G T C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATGAAWTTCTAAG
TTGAATGAAATTCGA--
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAAWTTCTAAG
NTTNTATGAATGTGNNC-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ATGAAWTTCTAAG---
----NTTTCTNAGAAA
 C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATGAAWTTCTAAG
ATGMATATDC---
 C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATGAAWTTCTAAG
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------ATGAAWTTCTAAG
ACTATGAATGAATGAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATGAAWTTCTAAG
ATGCATAATTCA-
 C G T A A C G T A C T G G C T A C G T A C G T A C G A T A C G T A T G C A C G T C G T A C G T A A C T G
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T