Information for 5-WCTCAGTATA (Motif 31)

C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A
Reverse Opposite:
G C A T C T G A C G A T C G T A A G T C A C G T T C A G C G T A C T A G G C T A
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.750
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif255.8
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets41.7 +/- 19.8bp
Average Position of motif in Background49.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----WCTCAGTATA---
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-WCTCAGTATA
AGCTCATTAT-
 A C G T C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----WCTCAGTATA---
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WCTCAGTATA--
NNTNNCAATATTAG
 A C G T A C G T C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WCTCAGTATA--
NNTNNCAATATTAG
 A C G T A C G T C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:WCTCAGTATA------
TAAGATTATAATACGG
 C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:WCTCAGTATA------
NANTATTATAATTNNN
 C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

POL002.1_INR/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:WCTCAGTATA
--TCAGTCTT
 C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-WCTCAGTATA----
CTTTCANTATGACTV
 A C G T C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:WCTCAGTATA-
-CCAAAAATAG
 C G A T A G T C C G A T A G T C C G T A T A C G A C G T G C T A G A C T C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G