Information for 17-TGACCACCCTCTGAAG (Motif 30)

A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
Reverse Opposite:
A G T C A G C T A C G T T A G C C G T A C T A G C G T A A C T G A T C G C T A G C G A T C T A G C A T G A C G T T A G C G T C A
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.694
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.4 +/- 23.3bp
Average Position of motif in Background56.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACCACCCTCTGAAG
GGACCACCCACG----
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGACCACCCTCTGAAG
------NSCACTYVAV
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGACCACCCTCTGAAG
-----AGCCACTCAAG
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

RARA::RXRA/MA0159.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGACCACCCTCTGAAG-
TGACCTCTCNNTGACCT
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGACCACCCTCTGAAG
-GACCCCCCGCTGCGC
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGACCACCCTCTGAAG
-GACCCCCCGCTGTG-
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGACCACCCTCTGAAG
-----AASCACTCAA-
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TGACCACCCTCTGAAG-
-------CCTTTGAWGT
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGACCACCCTCTGAAG
-GACCCCCCGCTGTGC
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGACCACCCTCTGAAG---
--CTTAACCACTTAAGGAT
 A C G T A C T G G T C A G A T C A G T C C G T A G A T C A T G C A G T C G A C T A G T C C G A T A T C G T C G A C T G A A C T G A C G T A C G T A C G T
A C G T A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T