Information for 16-AGTGGCDDAGTGTAAC (Motif 29)

C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
Reverse Opposite:
C T A G A C G T A G C T C T G A A G T C C G T A T G A C A C G T G C T A G A C T A C T G A G T C A G T C G T C A G T A C A C G T
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.796
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.2 +/- 11.5bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTGGCDDAGTGTAAC
-TTGGCATGGTGCCA-
 C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGTGGCDDAGTGTAAC
TGATTGGCTANN------
 A C G T A C G T C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGTGGCDDAGTGTAAC
TTRAGTGSYK---------
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCDDAGTGTAAC
NTNNTTAAGTGGNTNAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTGGCDDAGTGTAAC
-TTGGCA---------
 C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AGTGGCDDAGTGTAAC-
-------AGGTGTGAAM
 C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGTGGCDDAGTGTAAC
-GTGGAT---------
 C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGCDDAGTGTAAC
CTGATTGGTCNATTT----
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGTGGCDDAGTGTAAC-
-TTGGCANNNTGCCAAG
 C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C A C G T
A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCDDAGTGTAAC
AANTTCAAGTGGCTTN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G G T A C C G T A C A G T C G T A A C T G A C G T A C T G A G C T C T G A C G T A A G T C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T