Information for 14-VCACATTYCTTTCACT (Motif 25)

T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
Reverse Opposite:
G T C A T A C G C G A T A C T G T G C A T G C A T G C A C T A G T C A G G C T A C T G A C A G T A C T G G A C T A T C G A C T G
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.575
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif115.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets51.8 +/- 23.7bp
Average Position of motif in Background50.6 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD1/MA0090.2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:VCACATTYCTTTCACT
-CACATTCCAT-----
 T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:VCACATTYCTTTCACT
-CACATTCCAT-----
 T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:VCACATTYCTTTCACT
--ACATTCCA------
 T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--VCACATTYCTTTCACT
TGACACCT----------
 A C G T A C G T T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:VCACATTYCTTTCACT
GCACGTGTCNNNN---
 T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:VCACATTYCTTTCACT
NCACCTGTN-------
 T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--VCACATTYCTTTCACT
TCACACCT----------
 A C G T A C G T T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--VCACATTYCTTTCACT
SNGCACCTGCHS------
 A C G T A C G T T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---VCACATTYCTTTCACT
TTMACACCTT---------
 A C G T A C G T A C G T T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--VCACATTYCTTTCACT
TCACACCT----------
 A C G T A C G T T G A C T A G C C G T A T G A C G T C A A G C T C G A T A G T C G A T C A C G T A C G T A C G T G T A C C G T A A T G C C A G T
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T