Information for 9-ATGTTGGAATCGCCCT (Motif 14)

G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G C T A G G T A C A T C G G T C A A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C G T
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 28.7bp
Average Position of motif in Background31.0 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATGTTGGAATCGCCCT
----GGGAAATCCCCN
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGTTGGAATCGCCCT
NATGTTGCAA-------
 A C G T G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATGTTGGAATCGCCCT
-----GGAAANCCCC-
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATGTTGGAATCGCCCT
-----GGAAATCCCC-
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATGTTGGAATCGCCCT
--GGGGGAATCCCC--
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATGTTGGAATCGCCCT
-----GGAAATTCCC-
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATGTTGGAATCGCCCT
NGTAGGTTGGCATNNN---
 A C G T A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATGTTGGAATCGCCCT
-GGTTGGCAT------
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGTTGGAATCGCCCT
ATGATGCAAT------
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATGTTGGAATCGCCCT
GARTGGTCATCGCCC-
 G T C A A C G T A C T G A C G T A C G T A C T G A C T G G T C A C G T A A C G T A T G C A C T G A G T C A G T C A G T C C G A T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T