Information for 5-GAGKAAMCTYGCW (Motif 13)

A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
Reverse Opposite:
C G A T A C T G A T G C C T A G C G T A A C T G A C T G A C G T A C G T G T C A A G T C A C G T T A G C
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 28.2bp
Average Position of motif in Background27.7 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGKAAMCTYGCW
AGAGGAA-------
 A C G T A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGKAAMCTYGCW
--GGAAATTCCC-
 A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAGKAAMCTYGCW
----AAGCTTG--
 A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGKAAMCTYGCW
--GGAAATTCCC-
 A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGKAAMCTYGCW
-DGTAAACA----
 A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAGKAAMCTYGCW
ATGTAAACADGS-
 A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAGKAAMCTYGCW
TATGTAAACANG--
 A C G T A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGKAAMCTYGCW
CAAAGTAAACANNNN
 A C G T A C G T A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GAGKAAMCTYGCW
--GTGACCTT---
 A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGKAAMCTYGCW
--NTGACCTTGA-
 A C T G C G T A A C T G A C G T C G T A C G T A G T A C A G T C A C G T A G T C A T C G A G T C C G T A
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T