Information for 8-ATTGCTGCTGAGCTGG (Motif 11)

C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
Reverse Opposite:
A G T C A G T C G C T A A C T G G T A C C A G T T A G C G C T A C A T G G A T C G C T A C T A G G A T C T G C A T G C A G A C T
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.634
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif236.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets41.3 +/- 21.5bp
Average Position of motif in Background48.4 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTGCTGCTGAGCTGG
TNTCCTGCTGTGNNG-
 C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATTGCTGCTGAGCTGG
NNTCCTGCTGTGNNN-
 C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATTGCTGCTGAGCTGG
TCNCCTGCTGNGNNN-
 C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATTGCTGCTGAGCTGG
CCCCCTGCTGTG----
 C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATTGCTGCTGAGCTGG
CNNNGCTACTGTANNN-
 A C G T C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATTGCTGCTGAGCTGG
TNNTGCTACTGTNNNN-
 A C G T C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATTGCTGCTGAGCTGG
---CCTGCTGAGH---
 C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ATTGCTGCTGAGCTGG
--CGCAGCTGCG----
 C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATTGCTGCTGAGCTGG
--ANCAGCTG------
 C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ATTGCTGCTGAGCTGG
GGCCYCCTGCTGDGH---
 A C G T A C G T C T G A A C G T A C G T C T A G A G T C C A G T C A T G G A T C C G A T A C T G G T C A A C T G G T A C C G A T C T A G C T A G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T