Information for 1-AGCCATTCTBATGBTC (Motif 1)

C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A T A C G A T G C C G T A A C G T T A C G C G T A C T A G C G T A C T G A C G A T C T A G C T A G A G T C A C G T
p-value:1e-13
log p-value:-3.191e+01
Information Content per bp:1.837
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 22.7bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0023.1_Gata6_1/Jaspar

Match Rank:1
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGCCATTCTBATGBTC---
--NNANTCTTATCTNNNNN
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGCCATTCTBATGBTC--
---CTTTGTTATGCAAAT
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGCCATTCTBATGBTC
CAGCC------------
 A C G T C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AGCCATTCTBATGBTC
------TCTTATCT--
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:forward strand
Alignment:AGCCATTCTBATGBTC
-----TTCTTATCTGT
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AGCCATTCTBATGBTC-
------TCTTATCTCCC
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGCCATTCTBATGBTC
-TNTTATCTTATCTT-
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AGCCATTCTBATGBTC
--CCWTTGTY------
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AGCCATTCTBATGBTC
--CCTTTGTT------
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:AGCCATTCTBATGBTC
------YCTTATCTBN
 C G T A A C T G A G T C A G T C C G T A A G C T A C G T A G T C A C G T A G T C C G T A A C G T A T C G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C