Information for 9-CCAATCAGCGCCG (Motif 9)

G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
Reverse Opposite:
G A T C T C A G A T C G A T G C A C T G A G T C C A G T A T C G T G C A A C G T C G A T A C T G A C T G
p-value:1e-12
log p-value:-2.972e+01
Information Content per bp:1.755
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif111.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets48.2 +/- 27.7bp
Average Position of motif in Background47.1 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCAGCGCCG-
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.75
Offset:-7
Orientation:forward strand
Alignment:-------CCAATCAGCGCCG
AAATGGACCAATCAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCAATCAGCGCCG
AGCCAATCGG-----
 A C G T A C G T G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCAATCAGCGCCG
CCAATCAA-----
 G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCAATCAGCGCCG
ACTAGCCAATCA------
 A C G T A C G T A C G T A C G T A C G T G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCAATCAGCGCCG
-AAATCACTGC--
 G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCAATCAGCGCCG
CAAATCACTG---
 G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCAATCAGCGCCG
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PH0098.1_Lhx8/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCAATCAGCGCCG
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C G T G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAATCAGCGCCG
-AAATCACAGCA-
 G T A C G T A C G C T A G T C A A C G T A T G C G T C A A C T G T G A C A T C G A T G C A G T C C T A G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T