Information for 14-AGCCTCTTAAAAA (Motif 17)

G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T A C G T C A G T C G T A C G T A C T A G T C G A A C T G A C T G A G T C A C G T
p-value:1e-10
log p-value:-2.315e+01
Information Content per bp:1.804
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 16.1bp
Average Position of motif in Background35.7 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGCCTCTTAAAAA
--GCTCGTAAAAA
 G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A
A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGCCTCTTAAAAA--
AAACCTCGTAAAATTT
 A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGCCTCTTAAAAA--
AAAGCTCGTAAAATTT
 A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCTTAAAAA-
TAAGCCACTTGAATTT
 A C G T A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCTTAAAAA-
TAAGCCACTTGAAATT
 A C G T A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCCTCTTAAAAA-
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCTTAAAAA-
TAAGCCACTTAACATT
 A C G T A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCCTCTTAAAAA-
CATAACCACTTAACAAC
 A C G T A C G T A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCTTAAAAA-
TAAGCCACTTGAAATT
 A C G T A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCTTAAAAA--
ATAACCACTTGAAAATT
 A C G T A C G T G T C A A C T G G T A C A G T C A C G T A G T C A C G T A C G T G C T A C G T A C G T A C G T A C G T A A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T