Information for 12-TATAAAGCCG (Motif 13)

C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
Reverse Opposite:
T A G C C A T G A T C G T A G C A G C T G C A T A C G T G T C A G A C T G C T A
p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.673
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif422.1
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets44.3 +/- 22.7bp
Average Position of motif in Background51.2 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TATAAAGCCG
NGYCATAAAWCH-
 A C G T A C G T A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TATAAAGCCG----
GTATAAAAGGCGGGG
 A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TATAAAGCCG----
GTATAAAAGGCGGGG
 A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TATAAAGCCG
CCTTTTATAGNC-
 A C G T A C G T A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATAAAGCCG
GCAATAAAA---
 A C G T A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TATAAAGCCG
--TAATCCCN
 C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TATAAAGCCG
AAGCCATAAAA---
 A C G T A C G T A C G T A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TATAAAGCCG
CCAATAAAAA--
 A C G T A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TATAAAGCCG
GGCCATAAATCA-
 A C G T A C G T A C G T C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATAAAGCCG
TTTGAAACCG
 C G A T C T G A C A G T T G C A C G T A T C G A A T C G A T G C G T A C A T C G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G