Motif 20

Information for 15-CGCCCCACCTACT (Motif 20)

Reverse Opposite:

p-value:	1e-11
log p-value:	-2.671e+01
Information Content per bp:	1.810
Number of Target Sequences with motif	9.0
Percentage of Target Sequences with motif	0.92%
Number of Background Sequences with motif	10.3
Percentage of Background Sequences with motif	0.02%
Average Position of motif in Targets	57.0 +/- 27.0bp
Average Position of motif in Background	40.3 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)	1.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	1
Score:	0.64
Offset:	1
Orientation:	reverse strand
Alignment:	CGCCCCACCTACT -GCTCCGCCCMCY

PB0110.1_Bcl6b_2/Jaspar

Match Rank:	2
Score:	0.64
Offset:	-5
Orientation:	forward strand
Alignment:	-----CGCCCCACCTACT ATCCCCGCCCCTAAAA--

SP1/MA0079.3/Jaspar

Match Rank:	3
Score:	0.63
Offset:	1
Orientation:	forward strand
Alignment:	CGCCCCACCTACT -GCCCCGCCCCC-

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:	4
Score:	0.62
Offset:	1
Orientation:	forward strand
Alignment:	CGCCCCACCTACT -GCCACRCCCACY

SP2/MA0516.1/Jaspar

Match Rank:	5
Score:	0.60
Offset:	1
Orientation:	forward strand
Alignment:	CGCCCCACCTACT--- -GCCCCGCCCCCTCCC

KLF5/MA0599.1/Jaspar

Match Rank:	6
Score:	0.60
Offset:	1
Orientation:	forward strand
Alignment:	CGCCCCACCTACT -GCCCCGCCCC--

POL003.1_GC-box/Jaspar

Match Rank:	7
Score:	0.60
Offset:	-1
Orientation:	reverse strand
Alignment:	-CGCCCCACCTACT NAGCCCCGCCCCCN

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:	8
Score:	0.59
Offset:	1
Orientation:	reverse strand
Alignment:	CGCCCCACCTACT -GCCMCGCCCMCY

EGR1/MA0162.2/Jaspar

Match Rank:	9
Score:	0.59
Offset:	1
Orientation:	forward strand
Alignment:	CGCCCCACCTACT-- -CCCCCGCCCCCGCC

Klf4/MA0039.2/Jaspar

Match Rank:	10
Score:	0.58
Offset:	1
Orientation:	reverse strand
Alignment:	CGCCCCACCTACT -GCCCCACCCA--