Information for 11-TGACACTCAT (Motif 31)

C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
Reverse Opposite:
G C T A A C G T T A C G T C G A A C T G A G C T A C T G A G C T G T A C C G T A
p-value:1e-7
log p-value:-1.721e+01
Information Content per bp:1.728
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif388.2
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets49.0 +/- 24.0bp
Average Position of motif in Background52.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----TGACACTCAT--
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGACACTCAT
TTGACAG----
 A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGACACTCAT
ARNTGACA-----
 A C G T A C G T A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGACACTCAT
TTGACAGG---
 A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGACACTCAT
VGCTGWCAVB---
 A C G T A C G T A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGACACTCAT
NCTGTCAATCAN
 A C G T A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGACACTCAT
SCTGTCAVTCAV
 A C G T A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGACACTCAT
TGACACCT--
 C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGACACTCAT
GSCTGTCACTCA-
 A C G T A C G T A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGACACTCAT
KTTCACACCT--
 A C G T A C G T C G A T A C T G C T G A G T A C T C G A G T A C A G C T A T G C G T C A C G A T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T