Information for 12-AAKARAATGRGAA (Motif 26)

C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A G C T A C G T G T A C A C G T A G C T
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.865
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.0 +/- 24.5bp
Average Position of motif in Background52.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAKARAATGRGAA--
NNTNNACAATGGGANNN
 A C G T A C G T C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAKARAATGRGAA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAKARAATGRGAA
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAKARAATGRGAA---
----AAAGRGGAAGTG
 C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAKARAATGRGAA--
-----CSTGGGAAAD
 C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAKARAATGRGAA
AAAACAATGG---
 C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AAKARAATGRGAA
AACCCAATAAAATTCG--
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AAKARAATGRGAA
CTACCAATAAAATTCT--
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAKARAATGRGAA
CCAATAAAAA-----
 A C G T A C G T C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAKARAATGRGAA--
-----NATGGAAAAN
 C T G A C G T A A C T G G T C A C T G A C G T A C G T A A C G T C T A G C T A G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T