Information for 12-AGAGGAGAAAATAAGA (Motif 22)

C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
Reverse Opposite:
A C G T G T A C A G C T G C A T C G T A A G C T G A C T A C G T C G A T G A T C G A C T T A G C G A T C G C A T G A T C G A C T
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.677
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.61%
Number of Background Sequences with motif359.1
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets48.8 +/- 26.1bp
Average Position of motif in Background48.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAAAATAAGA
--AAGATAAGATAACA
 C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAGAAAATAAGA
TACTGGAAAAAAAA---
 A C G T C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAGAAAATAAGA
AGAAAGTGAAAGTGA--
 A C G T C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGAGGAGAAAATAAGA
GAAAGTGAAAGT----
 C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAGAAAATAAGA
ARGAGGMCAAAATGW--
 A C G T C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAGAAAATAAGA---
NANTGGAAAAANTGAGTCAN
 A C G T C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGGAGAAAATAAGA
AAATAAGAAAAAAC--
 C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAGAAAATAAGA
CAAAATCGAAACTAA--
 A C G T C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGAGAAAATAAGA
GGAAANTGAAACTNA--
 A C G T C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGAGGAGAAAATAAGA
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A C T A G A C T G C G T A C T A G C G T A C G T A C G T A T C G A G C A T C G T A T C G A A C T G T G C A
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A