Information for 6-VYWTTTTGCCAGY (Motif 15)

T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T
Reverse Opposite:
C T G A T A G C A C G T A C T G A C T G A G T C C G T A C T G A C G T A C G T A C G T A C T A G A G C T
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.815
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.4 +/- 10.6bp
Average Position of motif in Background39.0 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-VYWTTTTGCCAGY-
ANATTTTTGCAANTN
 A C G T T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:VYWTTTTGCCAGY-----
--NNNNTGCCAGTGATTG
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.69
Offset:5
Orientation:forward strand
Alignment:VYWTTTTGCCAGY
-----TTGCCAAG
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:VYWTTTTGCCAGY
------TGCCAA-
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:VYWTTTTGCCAGY
----CGTGCCAAG
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:VYWTTTTGCCAGY-
-----ATGCCAACC
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:VYWTTTTGCCAGY
----TTTTCCA--
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:VYWTTTTGCCAGY
---ATTTTCCATT
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:VYWTTTTGCCAGY-
TTTTTTTTCNNGTN
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:VYWTTTTGCCAGY
-----TTGACAGC
 T C A G G A T C C G A T A C G T A C G T A G C T A C G T A C T G A G T C A G T C C G T A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C