Information for 5-CAMCTCTRGSWTYRCC (Motif 6)

A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T C T G A C G T A C G A T A T C G A G T C A G C T C G T A A C T G G T C A A C T G A C T G A C G T A C T G
p-value:1e-15
log p-value:-3.606e+01
Information Content per bp:1.857
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.7 +/- 24.7bp
Average Position of motif in Background43.6 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAMCTCTRGSWTYRCC
CCACCTGTTGCAT----
 A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAMCTCTRGSWTYRCC
ANCCACCTGTTGCNC----
 A C G T A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAMCTCTRGSWTYRCC
--GGTCTGGCAT----
 A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAMCTCTRGSWTYRCC
NAACATCTGGATN----
 A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G A C G T A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAMCTCTRGSWTYRCC
AACATCTGGA------
 A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CAMCTCTRGSWTYRCC
TGACACCT-----------
 A C G T A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------CAMCTCTRGSWTYRCC
NNGGCGACACCTCNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CAMCTCTRGSWTYRCC-
CAKCTGKYCYYTTYCCC
 A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAMCTCTRGSWTYRCC
NNAATTCTCGNTNAN--
 A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------CAMCTCTRGSWTYRCC
NNTNCGCACCTGTNGAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T C T G A A C T G A T G C C G T A A C G T A G C T C T G A A G T C A G T C
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T A C G T A C G T