Information for 1-GATTCCCCCCTAT (Motif 5)

A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A C T G C T A G A C T G C T A G A C T G C G T A C G T A A C G T A G T C
p-value:1e-15
log p-value:-3.606e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.8 +/- 14.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GATTCCCCCCTAT-----
-NTCNTCCCCTATNNGNN
 A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GATTCCCCCCTAT
GGGGATTCCCCC----
 A C G T A C G T A C G T A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATTCCCCCCTAT---
-AAGCCCCCCAAAAAT
 A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GATTCCCCCCTAT---
AAATTCCCCCCGGAAGT
 A C G T A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GATTCCCCCCTAT
---TTCCCCCTAC
 A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GATTCCCCCCTAT
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GATTCCCCCCTAT
--TTCCCGCCWG-
 A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GATTCCCCCCTAT
---CCCCCCCCAC
 A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GATTCCCCCCTAT
---TCCCCA----
 A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GATTCCCCCCTAT
ANANGTGATACCCCATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G A T A G T C A G T C A G T C A G T C T G A C A G T C A C G T C G T A A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T A C G T A C G T