Information for 24-CTGGAGTTCATAY (Motif 36)

T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
Reverse Opposite:
C T G A A G C T C G T A A C G T C T A G C T G A C G T A A G T C A C G T T A G C A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.756
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif124.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets48.6 +/- 23.1bp
Average Position of motif in Background47.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGGAGTTCATAY
----NATTCAAAT
 T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGGAGTTCATAY
NCTGGAATGC----
 A C G T T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGGAGTTCATAY
--CGGTTTCAAA-
 T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGGAGTTCATAY
-TATTGTTTATT-
 T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CTGGAGTTCATAY
GAGTTCATTGAGTTCA---
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGGAGTTCATAY
ATCAAGGTCA---
 T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGGAGTTCATAY
NNATTGGACTTTNGNN
 A C G T A C G T A C G T T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGGAGTTCATAY-
----ACATCAAAGG
 T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTGGAGTTCATAY--
---NTGTTTAYATWW
 T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGAGTTCATAY
-TCAAGGTCATA-
 T G A C A C G T C T A G A C T G C G T A C T A G A C G T A G C T A G T C C G T A C G A T T C G A G A C T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T