Information for 14-CCCTATTTTC (Motif 35)

A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A G T C A C G T A C G T A A C G T C G T A A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.956
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.6 +/- 29.4bp
Average Position of motif in Background39.6 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCCTATTTTC--
--CTATTTTTGG
 A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCCTATTTTC----
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CCCTATTTTC-
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCCTATTTTC---
-KCTATTTTTRGH
 A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCCTATTTTC
-CTCATTGTC
 A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCCTATTTTC---
-GCTATTTTTGGM
 A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCTATTTTC----
NNNCCATTGTGTNAN
 A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCTATTTTC
--CCWTTGTY
 A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCTATTTTC-----
TTCTATTTTTAGNNN
 A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCCTATTTTC---
-GCTATTTTTAGC
 A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C