Information for 12-GCATTACCAG (Motif 33)

A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 28.3bp
Average Position of motif in Background52.6 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCATTACCAG
YCATTAMC--
 A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCATTACCAG
NGGGATTA----
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

HOXA2/MA0900.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCATTACCAG
CCTAATTACC--
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G
T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCATTACCAG
NNGGATTAGN--
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCATTACCAG
AGATGCAATCCC--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCATTACCAG--
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCATTACCAG--
--ATTTCCTGTN
 A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCATTACCAG-
-HTTTCCCASG
 A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C G T
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCATTACCAG---
---ATGCCAGACN
 A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

EVX1/MA0887.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCATTACCAG
GGTAATTAGC--
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C T G
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T A C G T