Information for 9-AAARMAGCCA (Motif 31)

G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A
Reverse Opposite:
A C G T C A T G A T C G G T A C C G A T C A T G A G T C C G A T C G A T A C G T
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.757
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif12.64%
Number of Background Sequences with motif2380.1
Percentage of Background Sequences with motif4.85%
Average Position of motif in Targets46.0 +/- 23.5bp
Average Position of motif in Background49.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AAARMAGCCA-
-----TGCCAA
 G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AAARMAGCCA
----CAGCC-
 G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAARMAGCCA--
---CGTGCCAAG
 G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAARMAGCCA-
--AAAAGTCAA
 G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAARMAGCCA-
---BCAGACWA
 G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAARMAGCCA----
--ACTAGCCAATCA
 G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAARMAGCCA
--NGAAGC--
 G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAARMAGCCA--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAARMAGCCA--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAARMAGCCA--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A C T A G G T A C C G T A A C T G A T G C G T A C C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G