Information for 20-CACATTTCTTACC (Motif 29)

A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.954
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 9.6bp
Average Position of motif in Background57.3 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0013.1_Cdx2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACATTTCTTACC---
NAATTTTATTACCNNN
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CACATTTCTTACC--
----NNACTTACCTN
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACATTTCTTACC
CACATTCCAT---
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACATTTCTTACC---
NAATTTTATTACCTNN
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACATTTCTTACC--------
NNTNANTTCTTATCTCTANANN
 A C G T A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACATTTCTTACC
CACATTCCAT---
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CACATTTCTTACC
---ATTTCCTGTN
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACATTTCTTACC------
--NNANTCTTATCTNNNNN
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CACATTTCTTACC
NNGCACCTTTCTCC--
 A C G T A C G T A C G T A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACATTTCTTACC
-ACATTCCA----
 A G T C G T C A A G T C C G T A A C G T A C G T A C G T A G T C A C G T A C G T C T G A A G T C A G T C
A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T