p-value: | 1e-9 |
log p-value: | -2.193e+01 |
Information Content per bp: | 1.781 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 2.20% |
Number of Background Sequences with motif | 34.8 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 36.4 +/- 18.3bp |
Average Position of motif in Background | 52.8 +/- 23.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGCATTCAAACTC CGGTTTCAAA--- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGCATTCAAACTC --NATTCAAAT-- |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGCATTCAAACTC- AGAGCCATAAAATTCG |
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Esrra/MA0592.2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGCATTCAAACTC-- ----TTCAAGGTCAT |
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BARHL2/MA0635.1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCATTCAAACTC ANCGTTTANN--- |
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PH0130.1_Otx2/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGCATTCAAACTC TGTAGGGATTAATTGTC |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGCATTCAAACTC TGAAGGGATTAATCATC |
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PH0124.1_Obox5_1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGCATTCAAACTC TAGAGGGATTAAATTTC |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCATTCAAACTC AAAGGTAATAAAATTT |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGCATTCAAACTC--- -----TCAAGGTCATA |
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