Information for 13-GGCTCGATGGCTT (Motif 24)

A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A G T C C G T A C G A T A G T C A C T G C T G A A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 18.1bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCTCGATGGCTT
CCGCCCAAGGGCAG
 A C G T A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGCTCGATGGCTT
--GTTAATGGCC-
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTCGATGGCTT
GGCGCGCT-----
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCTCGATGGCTT
GGCTCYAKCAYC-
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCTCGATGGCTT
DGATCRATAN---
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGCTCGATGGCTT
NGCTN--------
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGCTCGATGGCTT---
NGTAGGTTGGCATNNN
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGCTCGATGGCTT--
GGGTCAACGAGTTCA
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T A C G T A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGCTCGATGGCTT--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GGCTCGATGGCTT
-----GATGACGT
 A C T G A C T G A G T C A G C T G T A C C T A G C G T A A C G T C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T