Information for 15-GCTACACCTTGWCCTA (Motif 20)

A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A
Reverse Opposite:
A C G T C T G A A C T G A C T G C G A T G T A C C G T A C G T A T A C G A C T G A C G T A C T G A C G T C G T A A C T G G T A C
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.816
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 18.5bp
Average Position of motif in Background33.3 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA
---TGACCTTGACCT-
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA-
--TGACCTTTGCCCTAN
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA
---TGACCTTGACCT-
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTACACCTTGWCCTA
--TGACCTTTGCCCCA
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA
--TGACCTTTGCCCTA
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA--
--TGGACTTTGNNCTNTG
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA-
--TGGACTTTGNNCTCN
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA
ATTGGACTTTGACCCC
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA------
--------TTGACCTANTTATN
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTACACCTTGWCCTA
--TGACCTTTGACCTN
 A C T G A G T C A C G T C G T A T A G C G T C A A G T C A G T C A C G T A C G T A C T G C G A T G T A C A G T C A G C T C G T A
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C