Information for 8-GCTAAGGCCCAAA (Motif 17)

A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C T A G A C T G A C T G A T G C A G T C A C G T C G A T C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.920
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.1 +/- 18.9bp
Average Position of motif in Background52.9 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0015.1_Crx/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTAAGGCCCAAA-
AGGCTAATCCCCAANG
 A C G T A C G T A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-10
Orientation:reverse strand
Alignment:----------GCTAAGGCCCAAA
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTAAGGCCCAAA
----AGGCCTNG-
 A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCTAAGGCCCAAA
----AGGCCTAG-
 A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCTAAGGCCCAAA--
AAGCATACGCCCAACTT
 A C G T A C G T A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCTAAGGCCCAAA
GNNAGCTAATCCCCCN-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCTAAGGCCCAAA
CAGATAAGGN-----
 A C G T A C G T A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCTAAGGCCCAAA
NVAGATAAGR------
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCTAAGGCCCAAA
NAGATAAGNN-----
 A C G T A C G T A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCTAAGGCCCAAA---
GGGTGTGCCCAAAAGG
 A C T G A G T C A C G T C G T A C G T A C T A G T A C G A G T C G T A C A G T C C G T A C G T A C G T A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G