Information for 4-TTGGATCAGGTCATCC (Motif 6)

A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
Reverse Opposite:
T C A G A T C G C T G A C G A T A C T G G C T A A G T C A T G C A C G T A C T G T C G A C A G T G T A C G T A C T C G A C T G A
p-value:1e-23
log p-value:-5.496e+01
Information Content per bp:1.733
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.7 +/- 22.5bp
Average Position of motif in Background48.7 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TTGGATCAGGTCATCC
-----TRAGGTCA---
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:2
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TTGGATCAGGTCATCC
-------ACGTCATC-
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TTGGATCAGGTCATCC
-------AGGTCA---
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TTGGATCAGGTCATCC
----ATGACGTCATCN
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

PB0038.1_Jundm2_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGGATCAGGTCATCC-
-CCGATGACGTCATCGT
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C A C G T
A C G T A T G C A T G C A C T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T G T A C T C A G G A C T

ATF7/MA0834.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGGATCAGGTCATCC
--NGATGACGTCATNN
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A G T C C A T G T C G A G A C T A C T G G T C A A G T C T C A G G A C T G T A C G T C A A G C T G A T C T C A G

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTGGATCAGGTCATCC
---GATGACGTCATC-
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A C G T A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGGATCAGGTCATCC
AAAGATGATGTCATC-
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TTGGATCAGGTCATCC
----ATGACGTCATCN
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TTGGATCAGGTCATCC
------AAGGTCAC--
 A G C T A C G T A C T G A C T G G T C A A G C T G T A C C G T A A T C G C T A G C G A T G T A C C G T A A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T