Information for 3-TAGCAACATGGCTTTC (Motif 5)

A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T C G T A
p-value:1e-23
log p-value:-5.496e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 14.2bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAGCAACATGGCTTTC
---CAAGATGGCGGC-
 A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAGCAACATGGCTTTC
SCCTAGCAACAG-------
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAACATGGCTTTC
CCGCATAGCAACGGA------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAACATGGCTTTC
TACCATAGCAACGGT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-9
Orientation:forward strand
Alignment:---------TAGCAACATGGCTTTC
TGTGACCCTTAGCAACCGATTAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TAGCAACATGGCTTTC
TTGCAACATN------
 A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TAGCAACATGGCTTTC
---CAAGATGGCGGC-
 A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------TAGCAACATGGCTTTC
TGTTKCCTAGCAACM--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TAGCAACATGGCTTTC
-AAGCACATGG-----
 A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TAGCAACATGGCTTTC
-GGTCACATGAC----
 A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T