Information for 22-GCAAATCTTA (Motif 46)

A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.549e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 20.5bp
Average Position of motif in Background42.1 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCAAATCTTA-
-CAAATCACTG
 A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A A C G T
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCAAATCTTA
ATATGCAAAT----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATCTTA
TTATGCAAAT----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATCTTA
ATATGCAAATNNN-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCAAATCTTA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCAAATCTTA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAAATCTTA
--CAAGCTT-
 A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCAAATCTTA
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAAATCTTA
TATGCAAAT----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAAATCTTA---
--AAATCACAGCA
 A C T G A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A