Information for 25-ATCTTAATGTTAGTTT (Motif 45)

C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A A G T C A C G T C T G A C G T A G T A C C G T A A C G T A G C T C G T A C G T A A C T G C G T A A C G T
p-value:1e-6
log p-value:-1.583e+01
Information Content per bp:1.904
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 30.2bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATCTTAATGTTAGTTT
----GAATGTTTGTTT
 C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATCTTAATGTTAGTTT
CTATAATTGTTAGCG-
 C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ATCTTAATGTTAGTTT--
---NTNTTGTTGTTTGTN
 C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATCTTAATGTTAGTTT
ATATTAATTAA-----
 C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTAATGTTAGTTT
NNTNNCAATATTAG---
 A C G T C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTAATGTTAGTTT
NNTNNCAATATTAG---
 A C G T C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATCTTAATGTTAGTTT-
--NCNTTTGTTATTTNN
 C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:ATCTTAATGTTAGTTT
---ATTATGCTAATTT
 C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:ATCTTAATGTTAGTTT
-CCTTAATNGNTTTT-
 C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTAATGTTAGTTT
NNNTGTTGTTGTTNG---
 A C G T A C G T C G T A A C G T A G T C A C G T A C G T C T G A G T C A A C G T A C T G A C G T A G C T G T C A C T A G A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T A C G T