Information for 17-BTYACKCTHT (Motif 41)

A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T
Reverse Opposite:
C G T A C A G T C T G A T C A G G T C A T C A G A C G T T C G A C G T A T C A G
p-value:1e-8
log p-value:-1.850e+01
Information Content per bp:1.536
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif42.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets42.6 +/- 25.6bp
Average Position of motif in Background45.3 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:BTYACKCTHT
----NGCTN-
 A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-BTYACKCTHT
AGTCACGC---
 A C G T A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:BTYACKCTHT
--CACGCA--
 A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---BTYACKCTHT
GCTGTTACCCT--
 A C G T A C G T A C G T A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:BTYACKCTHT----
GTCACGCTCNCTGA
 A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T A C G T A C G T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:BTYACKCTHT
-TTCCTCT--
 A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:BTYACKCTHT----
TTCACGCATGAGTT
 A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:BTYACKCTHT
--CAAGCTT-
 A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--BTYACKCTHT--
TACTTCCGCTTTTT
 A C G T A C G T A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T A C G T A C G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:BTYACKCTHT-
-AASCACTCAA
 A G T C G C A T A G C T T G C A A G T C C A G T A G T C G A C T G T C A G C A T A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A