Information for 23-TCACAGNTGTCCTACA (Motif 36)

G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
Reverse Opposite:
C G A T A T C G C G A T C G T A A C T G A C T G C T G A G T A C C G T A C G T A A G T C A C G T A T C G A G C T A T C G C G T A
p-value:1e-10
log p-value:-2.399e+01
Information Content per bp:1.742
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.0 +/- 19.7bp
Average Position of motif in Background46.5 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCACAGNTGTCCTACA
TGACAGGTGTCA----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCACAGNTGTCCTACA
TGACAGGTGTCA----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCACAGNTGTCCTACA
TGACAGCTGTCA----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCACAGNTGTCCTACA
TGACAGCTGTCA----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCACAGNTGTCCTACA
--ACAGCTGTTV----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCACAGNTGTCCTACA
GAAGAACAGGTGTCCG---
 A C G T A C G T A C G T G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCACAGNTGTCCTACA
--ACAGCTGTTN----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCACAGNTGTCCTACA
NNVVCAGCTGBN-----
 A C G T G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCACAGNTGTCCTACA
--GCAGCTGTNN----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCACAGNTGTCCTACA
-GACAGGTGTN-----
 G C A T A T G C C T G A A T G C C G T A A C T G A C G T C G A T A C T G A G C T G T A C G T A C A C G T C G T A A T G C C G T A
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T