Information for 3-GTAGCCRCTA (Motif 26)

C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A
Reverse Opposite:
A C G T C G T A A C T G G A T C T C A G A T C G A G T C A G C T C G T A G T A C
p-value:1e-12
log p-value:-2.861e+01
Information Content per bp:1.740
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif133.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets68.2 +/- 27.8bp
Average Position of motif in Background49.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GTAGCCRCTA
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCCRCTA
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTAGCCRCTA
-AAACCGCAA
 C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCCRCTA
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTAGCCRCTA-
-AAACCGCAAA
 C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTAGCCRCTA
NHAACBGYYV
 C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTAGCCRCTA--
--AASCACTCAA
 C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTAGCCRCTA----
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGCCRCTA--
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C G T C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTAGCCRCTA--
--AGCAGCTGCT
 C A T G C G A T C T G A C T A G A T G C A G T C C T A G A G T C A C G T G T C A A C G T A C G T
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T