Information for 1-TAGCTTATTTMRC (Motif 2)

A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C
Reverse Opposite:
A C T G A G C T A C G T C G T A C G T A G C T A A C G T C G T A C G T A A C T G A G T C A C G T C G T A
p-value:1e-26
log p-value:-6.195e+01
Information Content per bp:1.914
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 17.2bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAGCTTATTTMRC
TNTTATCTTATCTT--
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGCTTATTTMRC
--TCTTATCT---
 A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C
A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T

PH0174.1_Vax1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTTATTTMRC--
CTNNGNTAATTAACNT
 A C G T A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C A C G T A C G T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

PH0096.1_Lhx6_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGCTTATTTMRC----
TACATTAATTAACGNTN
 A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C A C G T A C G T A C G T A C G T
C G A T T C G A G T A C T G C A G A C T G A C T T C G A C T G A A G C T A G C T C T G A C T G A A G T C C A T G A G T C G C A T A T G C

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAGCTTATTTMRC
-AGCTCATTAT--
 A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAGCTTATTTMRC
--YCTTATCTBN-
 A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C
A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T

PH0153.1_Prop1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTTATTTMRC---
GNNTNTTAATTAATNCN
 A C G T A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PH0159.1_Rhox6/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAGCTTATTTMRC----
TGCCTTAATTAATGCTC
 A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C A C G T A C G T A C G T A C G T
C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C

PH0001.1_Alx3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAGCTTATTTMRC----
TAAACTAATTAGCTGAG
 A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C A C G T A C G T A C G T A C G T
C G A T T C G A G C T A T C G A G A T C A G C T G T C A C T G A A G C T A C G T C T G A C T A G G A T C A G C T T A C G G C T A T C A G

NFIL3/MA0025.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TAGCTTATTTMRC--
----TTATGTAACAT
 A C G T C G T A A C T G A G T C A C G T A C G T C G T A C A G T A C G T A C G T G T C A C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T