Information for 13-GWCCYAWCSTTTTYAT (Motif 18)

A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T
Reverse Opposite:
C G T A A C G T C T G A C G T A C G T A C G T A C G T A A T C G A C T G G C A T A C G T C T G A A C T G A C T G C G T A A G T C
p-value:1e-15
log p-value:-3.645e+01
Information Content per bp:1.865
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 24.6bp
Average Position of motif in Background48.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GWCCYAWCSTTTTYAT-
AAAACATCGTTTTTAAG
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT---
---------NTTTTATTGG
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT--
---NNNNNNCTTTTATAN
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT--
---NNNNNNCTTTTATAN
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT---
---------TTTTTATTGG
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT----
----------TTTTATTRGN
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXA10/MA0899.1/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT----
---------NTTTTATTACN
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT---
---------TTTTTATTGC
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT---
---------NTTTTATTGG
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:GWCCYAWCSTTTTYAT
----------TTTAAT
 A C T G C G A T A G T C A G T C A G C T C G T A C G A T A G T C A T G C A C G T A C G T A C G T C G A T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T