Information for 8-CAGCGCAATCCTATTC (Motif 13)

G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C
Reverse Opposite:
A C T G C G T A C G T A A C G T C G T A C T A G C T A G C T G A C G A T A G C T A C T G A G T C A C T G G T A C C G A T A C T G
p-value:1e-18
log p-value:-4.253e+01
Information Content per bp:1.907
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 26.7bp
Average Position of motif in Background18.2 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGCGCAATCCTATTC-
-GATAACATCCTAGTAG
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T
A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Dmbx1/MA0883.1/Jaspar

Match Rank:2
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC-
NNNATTAATCCGNTTNA
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC-
NNNATTAATCCGNTTNA
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CAGCGCAATCCTATTC-
-----TAATCHGATTAC
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC----
----------CTATTTTTGG
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:6
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC-
-----TAATTNVATTAN
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC--
-NNNTCCATCCCATAANN
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T A C G T
A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC--
---AACAATGNTATTGTT
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T A C G T
A C G T A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC-
-----TAATYNRATTAR
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CAGCGCAATCCTATTC
----CTAATCCTCTT-
 G T A C C G T A A C T G A G T C C T A G G T A C C T G A C G T A G A C T A G T C A G T C A C G T C G T A A C G T A C G T G T A C
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T