Information for 5-YCAKKAWMSTCAAMCM (Motif 6)

A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C G T A T C G C G T A A T G C A C G T C G T A A C G T G T A C G T A C A C G T A C T G C T A G
p-value:1e-14
log p-value:-3.337e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 22.2bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:YCAKKAWMSTCAAMCM
----AAAAGTCAA---
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C
A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:YCAKKAWMSTCAAMCM
----GAAACTGAAACT
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:YCAKKAWMSTCAAMCM
----GAAAGTGAAAGT
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:YCAKKAWMSTCAAMCM
YCATTAMC--------
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:YCAKKAWMSTCAAMCM--
------CCATCAATCAAA
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:YCAKKAWMSTCAAMCM-----
---GGAAAGCGAAACCAAAAC
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:YCAKKAWMSTCAAMCM-
---------TCACACCT
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:YCAKKAWMSTCAAMCM----
----GAAGATCAATCACTTA
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:YCAKKAWMSTCAAMCM
------ACGTCA----
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:YCAKKAWMSTCAAMCM-
---------TCACACCT
 A G T C A G T C C G T A A C T G A C T G C G T A C G A T G T C A T A C G A C G T A T G C C G T A G T C A G T C A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T