Information for 17-ARAKCTTWYCCCKCTT (Motif 27)

C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G G T C A A C T G A T C G C T A G T C A G C G A T C G T A C T G A A C T G G T A C C G A T G A T C G C A T
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.688
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif38.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets61.2 +/- 19.5bp
Average Position of motif in Background50.3 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.52
Offset:9
Orientation:forward strand
Alignment:ARAKCTTWYCCCKCTT---
---------ACCACTTGAA
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ARAKCTTWYCCCKCTT
-----NCTTCCCGCCC
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ARAKCTTWYCCCKCTT
-----NYTTCCCGCC-
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ARAKCTTWYCCCKCTT
----VDTTTCCCGCCA
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ARAKCTTWYCCCKCTT------
-----CTTAACCACTTAAGGAT
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:ARAKCTTWYCCCKCTT
-----CTAATCCTCTT
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.50
Offset:9
Orientation:forward strand
Alignment:ARAKCTTWYCCCKCTT--
---------ACCACTTAA
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:forward strand
Alignment:ARAKCTTWYCCCKCTT--
---------ACCACTTAA
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-ARAKCTTWYCCCKCTT
NNANTCTTATCTNNNNN
 A C G T C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:ARAKCTTWYCCCKCTT
-----DTTTCCCGCC-
 C G T A C T A G C G T A C A T G A G T C A G C T A C G T G C T A A G T C A G T C A T G C G T A C C A G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T