p-value: | 1e-13 |
log p-value: | -3.057e+01 |
Information Content per bp: | 1.787 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 2.36% |
Number of Background Sequences with motif | 49.6 |
Percentage of Background Sequences with motif | 0.10% |
Average Position of motif in Targets | 55.8 +/- 22.8bp |
Average Position of motif in Background | 54.2 +/- 31.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AAAGGGTTTA --NGGGATTA |
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PH0121.1_Obox1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAAGGGTTTA----- TTAAGGGGATTAACTAC |
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RXRA::VDR/MA0074.1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AAAGGGTTTA GGGTCAACGAGTTCA |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAAGGGTTTA----- TTAGAGGGATTAACAAT |
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PITX3/MA0714.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAAGGGTTTA-- ---GGGATTANN |
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BARHL2/MA0635.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AAAGGGTTTA-- --ANCGTTTANN |
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TFCP2/MA0145.3/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAAGGGTTTA AAACCGGTTT- |
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GRHL1/MA0647.1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAAGGGTTTA NAAACCGGTTTT |
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PH0130.1_Otx2/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAAGGGTTTA------ TGTAGGGATTAATTGTC |
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Crx/MA0467.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAGGGTTTA- AAGAGGATTAG |
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