Information for 6-CACTCTGATTGGC (Motif 6)

A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C C G T A T C G A G A C T A T G C C T G A A T C G G T C A C T A G G A C T A C T G
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.796
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.8 +/- 31.6bp
Average Position of motif in Background62.1 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:CACTCTGATTGGC------
----CTGATTGGTCNATTT
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CACTCTGATTGGC---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CACTCTGATTGGC-
----CCGATTGGCT
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CACTCTGATTGGC----
-----TGATTGGCTANN
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CACTCTGATTGGC
----TTGATTGN-
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CACTCTGATTGGC---
----BTGABTGACAGS
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACTCTGATTGGC
--CNGTGATTTN-
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:8
Orientation:forward strand
Alignment:CACTCTGATTGGC-
--------TTGGCA
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CACTCTGATTGGC---
----NTGATTGACAGN
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACTCTGATTGGC
CCTGCTGAGH---
 A G T C C G T A A G T C A C G T A T G C A G C T A T C G C G T A A G C T C G A T A C T G A C T G A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T