Information for 3-GGCGCCTAGTGAT (Motif 4)

A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
Reverse Opposite:
T C G A C A G T A G T C C G T A A T G C A G C T G T C A A T C G T A C G A G T C A C T G A G T C A G T C
p-value:1e-18
log p-value:-4.312e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 21.4bp
Average Position of motif in Background63.4 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCCTAGTGAT
NNNNTTGGCGCCGANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGCGCCTAGTGAT
TTTGGCGCCAAA----
 A C G T A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCCTAGTGAT
NNNNTTGGCGCCGANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCGCCTAGTGAT--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCTAGTGAT--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCGCCTAGTGAT
AGCGCGCC-------
 A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GGCGCCTAGTGAT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGCGCCTAGTGAT-
GCCGCGCAGTGCGT
 A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGCGCCTAGTGAT
TCCGTCGCTTAAAAG-
 A C G T A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGCGCCTAGTGAT
RGGGCACTAACY---
 A C G T A C G T A C T G T A C G A G T C A C T G A G T C A T G C A C G T C T G A A T C G C G A T A C T G G T C A A G C T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T