Information for 17-CCVCTCTGTA (Motif 33)

A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A C T G C T G A T A C G A C T G A C T G T A C G
p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.785
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif67.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets44.1 +/- 18.1bp
Average Position of motif in Background53.1 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCVCTCTGTA
----GCTGTG
 A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCVCTCTGTA
---CTTTGT-
 A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCVCTCTGTA
AGGVNCCTTTGT-
 A C G T A C G T A C G T A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCVCTCTGTA-----
AATCGCACTGCATTCCG
 A C G T A C G T A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCVCTCTGTA------
AGGACGCTGTAAAGGGA
 A C G T A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCVCTCTGTA
GCCATCTGTT
 A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCVCTCTGTA
ACCATCTGTT
 A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCVCTCTGTA------
AAGACGCTGTAAAGCGA
 A C G T A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCVCTCTGTA------
AAGACGCTGTAAAGCGA
 A C G T A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCVCTCTGTA
VBSYGTCTGG-
 A C G T A T G C A G T C T G A C A T G C A G C T A G T C C G A T A C T G G C A T C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T