Information for 23-TTCACACATTCAT (Motif 30)

C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T C T A G C G T A C G T A A C G T A C T G A C G T C T A G A C G T A C T G C T G A C G T A
p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 13.3bp
Average Position of motif in Background72.5 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCACACATTCAT
TTCACACCTT---
 C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTCACACATTCAT
TTMACACCTT---
 C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTCACACATTCAT
NTTTTCACACCTT---
 A C G T A C G T A C G T C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TTCACACATTCAT------
-----ACATTCATGACACG
 C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTCACACATTCAT-----
-GACCACATTCATACAAT
 C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACATTCAT
TTTCACACCT----
 A C G T C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACATTCAT
CTTCACACCTA---
 A C G T C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACATTCAT
TTTCACACCTN---
 A C G T C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACATTCAT
KTTCACACCT----
 A C G T C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCACACATTCAT---
NNCATTCATTCATNNN
 C G A T A G C T A G T C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A C G A T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T