Information for 13-TAGCGACGGT (Motif 28)

C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C A T C G C A G T A G T C A C T G A G T C A G C T C G T A
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.863
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.7 +/- 30.5bp
Average Position of motif in Background55.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGACGGT
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGACGGT
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGACGGT
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------TAGCGACGGT----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGCGACGGT----
TNNTGCTACTGTNNNN
 A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGCGACGGT----
CNNNGCTACTGTANNN
 A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TAGCGACGGT
SCCTAGCAACAG-
 A C G T A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAGCGACGGT
CAGCC-----
 C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGACGGT--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGACGGT------
NNANTAACGGTTNNNAN
 A C G T C G A T C T G A A C T G A G T C A C T G G C T A A T G C C T A G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A